ANNEX
PART BReporting
1.General provisions for reporting of the data
Member States shall draft reports and include the information referred to in point 2 for each individual isolate, considering separately each bacterial species and animal population combination and bacterial species and food combination referred to in point 1 of Part A. Member States shall submit the results of the harmonised AMR monitoring provided for in this Decision in the form of isolate-based data using the data dictionary and the electronic collection forms provided by EFSA. Member States shall describe sampling designs, stratification and randomisation procedures per animal populations and food categories.
Where AMR monitoring is performed by using antimicrobial susceptibility testing, Member States shall report the information referred to in point 2.1.
Where AMR monitoring is performed by using WGS, Member States shall report the information referred to in point 2.2.
Where Member States decide to report to EFSA data collected on a voluntary basis, these data shall be reported separately from data whose collection is compulsory.
2.Reporting dataset
2.1.Reporting antimicrobial susceptibility testing results
The following information shall be included for each individual isolate:
Unique identifier or code of the isolate
Bacterial species
Serovar (for Salmonella spp.)
Food-producing animal population or food category
Stage of sampling
Type of sample
Trade Control and Expert System (TRACES) code of the border control post (for testing of imported meat only)
Common Health Entry Document (CHED) reference of the consignment (for testing of imported meat only)
Country of origin of the consignment (for testing of imported meat only)
Sampler
The sampling strategy
Date of sampling
Date of start of analysis (isolation)
Identifier or code of the isolate given by the laboratory performing the antimicrobial susceptibility testing of the isolate
Date of susceptibility testing
Antimicrobial substance
Minimum Inhibitory Concentration (MIC) value (in mg/L)
Synergy testing with clavulanic acid for ceftazidime
Synergy testing with clavulanic acid for cefotaxime
2.2.Reporting WGS testing results
The following information shall be included for each individual isolate:
Unique identifier or code of the isolate
Bacterial species
Food-producing animal population or food category
Stage of sampling
Type of sample
TRACES code of the border control post (for testing of imported meat only)
CHED reference of the consignment (for testing of imported meat only)
Country of origin of the consignment (for testing of imported meat only)
Sampler
The sampling strategy
Date of sampling
Date of start of analysis (isolation)
Identifier or code of the isolate given by the laboratory
Date of sequencing
Version of the predictive tool
AMR-conferring genes data
Sequencing technology used
Library preparation used